arima genomics mapping pipeline (Arima Genomics Inc)
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Arima Genomics Inc
arima genomics mapping pipeline
Arima Genomics Mapping Pipeline, supplied by Arima Genomics Inc, used in various techniques. Bioz Stars score: 96/100, based on 199 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/arima+genomics+mapping+pipeline/Mapping+Pipeline/pm42838755-291-22-22
Average 96 stars, based on 199 article reviews
Arima Genomics Mapping Pipeline, supplied by Arima Genomics Inc, used in various techniques. Bioz Stars score: 96/100, based on 199 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/arima+genomics+mapping+pipeline/Mapping+Pipeline/pm42838755-291-22-22
Average 96 stars, based on 199 article reviews
arima genomics mapping pipeline - by Bioz Stars,
2026-10
96/100 stars
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Hi-C:Article Title: Chromosome-scale genome assembly of diploid halophyte Thinopyrum bessarabicum excludes J genome from polyploid Thinopyrum ancestry Article Snippet: .. Hi-C reads were trimmed with Trimmomatic v0.39 and aligned to the contig assembly using the Article Title: Whole-genome phylogenomics and synteny resolve a single origin of body-plan asymmetry in flatfishes Article Snippet: .. Hi-C reads were then mapped to each cleaned haplotype assembly using the Article Title: X-Y divergence of house fly ( Musca domestica ) proto-sex chromosomes follow distinct evolutionary trajectories despite residing in the same genome Article Snippet: .. For the primary assembly, we performed Purge_dups (version 1.2.5) [ ] to remove haplotigs and then scaffolded the purged assembly using YaHS (version 1.2) [ ] with the alignment of Hi-C reads generated through BWA [ ], following Article Title: Living by the sea: chromosome-scale genome assembly and salt gland transcriptomes provide insights into ion regulatory mechanisms in the saline-tolerant mosquito Aedes togoi Article Snippet: .. The Article Title: A chromosome-scale reference genome and integrative transcriptome provide insight into tissue- and stress-specific responses in tetraploid sainfoin (Onobrychis viciifolia) Article Snippet: .. Hi-C reads were trimmed using Cutadapt (Martin ) with the flag -u 5 and aligned, filtered and combined using the Article Title: Haplotype-resolved genome of a dry-preservable cell line reveals chromosome evolution and DNA damage. Article Snippet: .. For chromosome-scale scaffolding, Hi-C reads from our previous study (Yoshida et al, 2022b) (NCBI accession ID: SRR12736658, SRR12736657) were processed using the Scaffolding:Article Title: Whole-genome phylogenomics and synteny resolve a single origin of body-plan asymmetry in flatfishes Article Snippet: .. Hi-C reads were then mapped to each cleaned haplotype assembly using the Article Title: Haplotype-resolved genome of a dry-preservable cell line reveals chromosome evolution and DNA damage. Article Snippet: .. For chromosome-scale scaffolding, Hi-C reads from our previous study (Yoshida et al, 2022b) (NCBI accession ID: SRR12736658, SRR12736657) were processed using the Generated:Article Title: X-Y divergence of house fly ( Musca domestica ) proto-sex chromosomes follow distinct evolutionary trajectories despite residing in the same genome Article Snippet: .. For the primary assembly, we performed Purge_dups (version 1.2.5) [ ] to remove haplotigs and then scaffolded the purged assembly using YaHS (version 1.2) [ ] with the alignment of Hi-C reads generated through BWA [ ], following |